Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801233.1_cds_XP_016473655.1_6550
CDS Infomation

[gene=LOC107795494] [db_xref=GeneID:107795494] [protein=serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3] [protein_id=XP_016473655.1] [location=join(41514..41631,44064..44167,44262..44360,44613..44732,45079..45288,46032..46123,46222..46340,46478..46601,46789..46912,48412..48480,48570..48661,48746..48823,48918..48985,49098..49234)] [gbkey=CDS]
Sequence

ATGAACGGTGGTGATGGTGGAGATGTCGCGACAGCTCCGGCGGGTCCACCACCGCCGCTT
GAGTGGAAATTCTCTCAGGTATTTGGTGAGCGTACGGCCGGCGAGGAAGTTCAGGAAGTT
GATATCATCTCCGCAATTGAGTTCGATAAAACTGGTGACCATCTTGCTACTGGAGATCGT
GGGGGTAGGGTGGTATTATTTGAAAGGACTGATACAAAAGAGCATATTGGTAGTCGAAGA
GAGCTAGAGAGAATGGACTATCCTGTGAGTCGCCATCCAGAGTTCCGCTACAAGACAGAA
TTTCAAAGCCATGAACCTGAGTTTGATTATCTGAAGAGTTTGGAGATTGAGGAGAAAATC
AACAAGATCCGTTGGTGCCAATCGCCTAATGGTGCACTCTTTCTTCTATCTACCAACGAC
AAAACCATAAAGTTTTGGAAGGTCCAAGAGAAGAAAGTTAAGAAGCTATCCGATATGACT
ATCGATCCTCCCAGGGCTGTTGGGAATGGCAGTGTGGCCAGTTCTAGTGTTTCTTCCAGT
CCAAAGCAATGTCTTGCAAATGGGAGCAATGCAGATAGATCTTTCAATTGCTTGAGCAAT
GATTTGTCGTTTCCACCCGGGGGCATTTCCTCATTGCGTTTACCTGTGGTAGTTACAAGT
AATGAGACCAGCCTTGTTGCAAGGTGCAGAAGAGTGTATGCTCATGCACATGACTATCAT
ATCAACTCTATTTCAAATAACAGTGATGGCGAAACATTTATATCGGCTGACGATCTTCGT
ATAAACCTGTGGAACTTGGAAATAAGCAATCAGAGTTTCAACATTGTTGATGTCAAGCCG
ACAAATATGGAAGATCTAACTGAGGTGATAACTTCAGCAGAATTTCATCCTACTCACTGT
AACACTTTAGCTTATAGTAGTTCAAAAGGGTCAATTCGTCTCATAGATCTGCGGCAGTCA
GCTTTATGCGACTCACATTCTAAATTGTTCGAGGAACAAGAAGCACCTGGTTCAAGATCT
TTTTTCACCGAGATAATTGCTTCAATTTCAGATATTAAATTTTCCAAGGATGGAAGATAC
ATACTCAGTCGTGACTATATGACCCTAAAGCTATGGGACATAAATATGGATTCTGGTCCA
GTATCAACCTTCCAGGTTCATGAATATTTGAGACCAAAGCTATGTGATTTATATGAGAAC
GACTCCATTTTTGATAAGTTCGAGTGTTGCCTTAGTGGTGATGGGCTGCGAGTAGCAACT
GGTTCTTATAGCAATCTTTTCCGTGTTTTTGGTTGTGCTGCGGGGACTACTGAAGCTACT
ACACTGGAAGCTAGCAAAAACCCCATGAGACAAGTGCAGACCCCTTCAAGGCCTTCCAGG
TCCCTGAGCAGTAGCATAACACGTGTAGTCAGGAGAGGATCAGAGAGTCCAGGGGTTGAT
GCAAATGGAAATTCATTTGATTTCACAACAAAGCTGCTCCATCTAGCATGGCATCCAACT
GAAAATTCGATTGCCTGTGCCGCTGCAAACAGCTTGTATATGTACTACGCATAA

Peptide Sequence

PEP ID

XP_016473655.1
PEP Infomation

PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3 [Nicotiana tabacum]
Sequence

MNGGDGGDVATAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDTKEHIGSRRELERMDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQSPNGALFLLSTNDKTIKFWKVQEKKVKKLSDMTIDPPRAVGNGSVASSSVSSS
PKQCLANGSNADRSFNCLSNDLSFPPGGISSLRLPVVVTSNETSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHC
NTLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFSKDGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRVFGCAAGTTEATTLEASKNPMRQVQTPSRPSRSLSSSITRVVRRGSESPGVD
ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA

Transcript Sequence

Gene sequence data has not been registered.